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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11916816_11917966_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11916816 - 11917966

Intron Length:

1151

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCACATAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

CTTTATTTATGT

Flanking Amino Acid:

ELRQLRQKCQELTQECDEKK

Intron Amino Acid Position:

520

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

1.1

79.2

36.3

Major BPS

88.7

0.96

0.8

36.5

Major PPT

65.1

0.34

1.1

70.4

33.9

Minor 5ss

31.5

-2.1

2.4

34.9

40.7

Minor BPS

49.2

0.02

2.1

72.15

45.1

Associated Gene:

Gene:

IFT81

Ensembl Gene ID:

ENSAPLG00000001267

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001452

11908782 - 11949860

41079