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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11931826_11934243_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11931826 - 11934243

Intron Length:

2418

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCACT

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAG

U12 Branch Point Sequence:

TTTCTTTTAGTT

Flanking Amino Acid:

RSDLNVLEMKINEVNAQINQ

Intron Amino Acid Position:

316

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

84.4

33.5

Major BPS

60.2

0.25

1.6

61.1

45.5

Major PPT

85.8

0.81

0.8

83.6

31.4

Minor 5ss

-0.9

2.9

58.6

45.7

Minor BPS

63.3

0.5

1.5

80.64

35.6

Associated Gene:

Gene:

IFT81

Ensembl Gene ID:

ENSAPLG00000001267

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001452

11908782 - 11949860

41079