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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11944977_11947931_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11944977 - 11947931

Intron Length:

2955

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCAATT

5'SS Class:

major

3'SS Sequence:

TCTCATTTTATAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATATTTTTATCT

Flanking Amino Acid:

DDTVADVNKQYEELMEAFKN

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.2

75.5

40.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.2

0.7

0.8

32.2

Minor 5ss

43.6

-0.7

3.3

66.2

44.9

Minor BPS

64.2

0.53

1.5

78.56

37.8

Associated Gene:

Gene:

IFT81

Ensembl Gene ID:

ENSAPLG00000001267

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039505

11942585 - 11949860

7276

ENSAPLT00000001452

11908782 - 11949860

41079