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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11948899_11949716_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11948899 - 11949716

Intron Length:

818

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

TACAACTATGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

TTATTTACAACT

Flanking Amino Acid:

SDVLGEIDPKHIVDIREELP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

67.8

43.5

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

61.8

0.27

55.3

39.7

Minor 5ss

28.6

-2.5

3.5

37.8

47.1

Minor BPS

54.9

0.23

1.8

77.75

38.4

Associated Gene:

Gene:

IFT81

Ensembl Gene ID:

ENSAPLG00000001267

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039505

11942585 - 11949860

7276

ENSAPLT00000001452

11908782 - 11949860

41079