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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11963093_11963638_F


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
11963093 - 11963638

Intron Length:
546

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CGT|GTAAGTGCA

5'SS Class:
major

3'SS Sequence:
GTGTTCTTCACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTGTTTTTAATT

Flanking Amino Acid:
NVHFPKFNYTVQNISPNFNS

Intron Amino Acid Position:
208

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74
0.56
1.1
68
37.2

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
78.1
0.63
0.9
72.3
37.9

Minor 5ss
35
-1.7
3.2
42.4
44.3

Minor BPS
78.1
0.96
1
86.75
33.6

Associated Gene:

Gene:
P2RX7

Ensembl Gene ID:

Chromosome:
16

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

11955414 - 11970342
14929