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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11968513_11969307_F


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
11968513 - 11969307

Intron Length:
795

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAAGAAT

5'SS Class:
strong_major

3'SS Sequence:
TTCTGCTCTACAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGCTAAT

U12 Branch Point Sequence:
TTCTGCTCTACA

Flanking Amino Acid:
KYETVLEPKQVMLVSYVDKP

Intron Amino Acid Position:
388

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.1
0.78
0.9
81.1
32.6

Major BPS
79.3
0.73
1.1
77.9
34.9

Major PPT
82.6
0.73
0.8
76.4
32.4

Minor 5ss
33.3
-1.9
3.3
47.8
47.9

Minor BPS
48.4
-0.1
2.3
67.56
44.6

Associated Gene:

Gene:
P2RX7

Ensembl Gene ID:

Chromosome:
16

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

11955414 - 11970342
14929