Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_11975847_11976054_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11975847 - 11976054

Intron Length:

208

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGAGCT

5'SS Class:

major

3'SS Sequence:

TGTTGTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

ACTTATTTACTT

Flanking Amino Acid:

CPVEDDYHVPKPAFLQGAEN

Intron Amino Acid Position:

156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

0.9

71.4

Major BPS

74.5

0.61

79.6

29.1

Major PPT

86.1

0.81

0.8

80.6

Minor 5ss

29.3

-2.4

3.4

39.8

Minor BPS

53.3

0.18

1.8

70.58

41.2

Associated Gene:

Gene:

P2RX4

Ensembl Gene ID:

ENSAPLG00000002558

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002605

11973856 - 11979327

5472

ENSAPLT00000019830

11973856 - 11978701

4846