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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11984277_11985336_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11984277 - 11985336

Intron Length:

1060

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTATG

5'SS Class:

strong_major

3'SS Sequence:

CCTGGTCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTAAC

U12 Branch Point Sequence:

CCAACCCCAACC

Flanking Amino Acid:

VKHIPSLATVILVKTMIRKR

Intron Amino Acid Position:

444

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.8

79.6

35.4

Major BPS

54.4

0.11

1.2

36.4

Major PPT

75.9

0.58

0.9

68.6

37.3

Minor 5ss

-1.8

2.8

39.3

40.3

Minor BPS

45.8

-0.3

1.9

53.2

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003190

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003296

11983384 - 11990485

7102