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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11986367_11986872_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11986367 - 11986872

Intron Length:

506

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGCCTGCA

5'SS Class:

major

3'SS Sequence:

CTGGGGAGGACAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

GATATTTTGATT

Flanking Amino Acid:

MVFGSAGFVLRLHAWGWVPV

Intron Amino Acid Position:

353

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.1

0.24

1.2

54.9

38.3

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

48.1

-0.1

1.2

38.3

43.5

Minor 5ss

32.1

-2

3.3

38.4

41.8

Minor BPS

57.1

0.3

1.2

68.43

36.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003190

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003296

11983384 - 11990485

7102