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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11987455_11987741_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11987455 - 11987741

Intron Length:

287

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTACATGGG

5'SS Class:

weak_major

3'SS Sequence:

GGCCGGGAGCCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTAACAC

U12 Branch Point Sequence:

CTTTCGGCATCT

Flanking Amino Acid:

EVLDDPSEDHLSVLCLCSPV

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.9

0.07

1.2

44.8

43.2

Major BPS

61.1

0.28

1.1

69.4

35.9

Major PPT

46.5

-0.2

1.1

30.7

40.9

Minor 5ss

33.3

-1.9

3.5

48.7

47.5

Minor BPS

40.1

-0.6

2.8

67.57

48.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003190

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003296

11983384 - 11990485

7102