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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12008956_12009295_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12008956 - 12009295

Intron Length:

340

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAACTAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATAAC

U12 Branch Point Sequence:

GGTGTCATAACA

Flanking Amino Acid:

EPEVHKTSVVGLFLRHMILA

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

1.1

76.2

39.9

Major BPS

65.3

0.38

1.1

66.2

36.5

Major PPT

0.97

0.6

88.6

20.7

Minor 5ss

41.6

-0.9

2.6

54.9

42.2

Minor BPS

54.5

0.14

1.7

65.59

40.4

Associated Gene:

Gene:

ANAPC5

Ensembl Gene ID:

ENSAPLG00000003505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003634

11996311 - 12010894

14584