Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_12038014_12041523_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12038014 - 12041523

Intron Length:

3510

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTGCA

5'SS Class:

major

3'SS Sequence:

TATGTGTAAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TATGTGTAAACA

Flanking Amino Acid:

QSCIMRQCIAPVLPHTAVCL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

69.1

35.7

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

64.3

0.32

1.1

45.1

Minor 5ss

35.2

-1.7

3.2

47.2

42.3

Minor BPS

46.4

-0.2

2.3

63.38

43.3

Associated Gene:

Gene:

KDM2B

Ensembl Gene ID:

ENSAPLG00000004534

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004694

12025062 - 12041559

16498