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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12158473_12160784_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12158473 - 12160784

Intron Length:

2312

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCGC

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTCCCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACCAAA

U12 Branch Point Sequence:

TCCTACCAAACC

Flanking Amino Acid:

ELEEEFRQLQETHKVYRQKL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

63.9

42.4

Major BPS

54.9

0.12

1.2

Major PPT

81.9

0.72

0.7

77.1

24.8

Minor 5ss

25.7

-2.8

3.1

32.8

42.2

Minor BPS

46.2

-0.3

2.1

59.84

45.2

Associated Gene:

Gene:

TMEM120B

Ensembl Gene ID:

ENSAPLG00000004954

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045059

12158404 - 12166560

8157

ENSAPLT00000005120

12158404 - 12165426

7023