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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12160904_12162381_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12160904 - 12162381

Intron Length:

1478

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGGGGA

5'SS Class:

major

3'SS Sequence:

TGTGTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

AAAATGTAAAGG

Flanking Amino Acid:

TLRDLKHSLQRCKPRATPEE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

64.4

41.8

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

85.9

0.81

0.8

80.6

Minor 5ss

29.1

-2.4

3.5

38.1

46.8

Minor BPS

35.7

-1.2

2.3

35.76

39.4

Associated Gene:

Gene:

TMEM120B

Ensembl Gene ID:

ENSAPLG00000004954

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045059

12158404 - 12166560

8157

ENSAPLT00000005120

12158404 - 12165426

7023