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Intron Name: Anas_platyrhynchos_platyrhynchos_16_122120_122155_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

122120 - 122155

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAAGCAA

5'SS Class:

weak_major

3'SS Sequence:

AGAAGTTGAGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

AAGCAAATAATT

Flanking Amino Acid:

HDKWKESGSSSGSFLKPRDF

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.9

0.09

1.1

48.5

37.3

Major BPS

71.2

0.53

70.3

31.9

Major PPT

50.5

0.01

1.2

44.1

45.8

Minor 5ss

26.9

-2.7

3.3

38.6

46.6

Minor BPS

42.6

-0.4

1.9

56.91

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018136

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025783

113425 - 122208

8784