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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12233883_12234162_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12233883 - 12234162

Intron Length:

280

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TGAGGATGAAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGTAAA

U12 Branch Point Sequence:

TTTCCTGTAAAG

Flanking Amino Acid:

RALVKAAPGKDDEEDDEDED

Intron Amino Acid Position:

1051

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

67.5

40.3

Major BPS

62.9

0.32

1.2

65.3

38.6

Major PPT

41.6

-0.4

1.7

35.9

43.9

Minor 5ss

40.2

-1.1

2.7

49.2

47.1

Minor BPS

-0.1

2.2

65.96

41.8

Associated Gene:

Gene:

SETD1B

Ensembl Gene ID:

ENSAPLG00000005217

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005412

12201526 - 12242533

41008