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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12249100_12249245_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12249100 - 12249245

Intron Length:

146

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCTGC

5'SS Class:

major

3'SS Sequence:

GTCCTCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGGTGAC

U12 Branch Point Sequence:

AGCCCAACACCA

Flanking Amino Acid:

LEVIQRHNHQGFGAGNFKSL

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

64.1

43.4

Major BPS

48.9

-0

1.3

40.5

41.4

Major PPT

76.5

0.6

0.8

69.7

31.1

Minor 5ss

42.8

-0.8

3.2

58.8

46.1

Minor BPS

36.1

-1

1.9

42.94

37.7

Associated Gene:

Gene:

HPD

Ensembl Gene ID:

ENSAPLG00000005747

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005945

12248989 - 12252734

3746