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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12250468_12250559_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12250468 - 12250559

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTTGT

5'SS Class:

major

3'SS Sequence:

CCCGCAGGCCGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGCTGAG

U12 Branch Point Sequence:

CTCCCCGCAGGC

Flanking Amino Acid:

PLFKDPLLPRLAKLSFVDHV

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.49

1.1

68.2

39.3

Major BPS

-0.2

1.6

40.4

42.3

Major PPT

42.1

-0.4

1.6

33.8

34.7

Minor 5ss

39.4

-1.2

59.1

45.4

Minor BPS

35.5

-1.1

2.3

43.44

44.2

Associated Gene:

Gene:

HPD

Ensembl Gene ID:

ENSAPLG00000005747

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005945

12248989 - 12252734

3746