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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12250867_12251006_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12250867 - 12251006

Intron Length:

140

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCAGC

5'SS Class:

major

3'SS Sequence:

TCCCCCTGCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGGCAC

U12 Branch Point Sequence:

TGCGGCAGGACA

Flanking Amino Acid:

EVEDCDFIVQKAKERGAVVV

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

1.1

67.1

44.6

Major BPS

-0.3

1.5

48.8

46.3

Major PPT

68.1

0.41

0.9

60.4

35.3

Minor 5ss

38.3

-1.3

3.1

51.6

45.2

Minor BPS

39.3

-0.8

2.1

48.66

41.8

Associated Gene:

Gene:

HPD

Ensembl Gene ID:

ENSAPLG00000005747

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005945

12248989 - 12252734

3746