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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12254188_12254490_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12254188 - 12254490

Intron Length:

303

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

GTGTCGCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCCAT

U12 Branch Point Sequence:

AGCCCTCCCATG

Flanking Amino Acid:

RVRAARHNIACLQNDHKALM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.7

0.42

1.1

56.5

42.7

Major BPS

59.9

0.25

1.3

70.1

Major PPT

65.9

0.36

58.4

38.4

Minor 5ss

29.6

-2.3

3.2

45.3

Minor BPS

34.6

-1.3

1.8

32.65

34.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033787

12253864 - 12256230

2367