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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12263932_12264022_F

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

12263932 - 12264022

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCCTGG

5'SS Class:

weak_minor

3'SS Sequence:

GTGGGCCTTGCAG|G

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

AAAAGAG

U12 Branch Point Sequence:

TGTGGTGGGATT

Flanking Amino Acid:

GIQCLSYDPEGCFLAAGFTD

Intron Amino Acid Position:

338

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.6

0.37

1.2

53.2

46.3

Major BPS

40.9

-0.5

1.3

32.8

31.9

Major PPT

67.2

0.39

58.3

43.1

Minor 5ss

67.1

0.58

1.9

73.6

Minor BPS

36.9

-0.9

2.3

55.32

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006322

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006575

12258711 - 12265068

6358