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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12268335_12271056_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12268335 - 12271056

Intron Length:

2722

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTTGTCAG

5'SS Class:

major

3'SS Sequence:

CCTTCATCTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTCAT

U12 Branch Point Sequence:

TTGCCTTCATCT

Flanking Amino Acid:

AMGFYPSEEEIEEMINEVKF

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.2

62.7

43.2

Major BPS

0.62

1.1

77.2

Major PPT

75.5

0.57

0.8

29.6

Minor 5ss

-1.6

2.6

41.2

45.2

Minor BPS

52.5

0.16

1.8

73.58

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030755

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025511

12265362 - 12273660

8299