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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12354238_12354477_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12354238 - 12354477

Intron Length:

240

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAGATAAG

5'SS Class:

major

3'SS Sequence:

CTCCTAGCGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGGGCAT

U12 Branch Point Sequence:

CATCTCCTAGCG

Flanking Amino Acid:

PETRVTLKMDGCQEPENS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.1

0.36

1.2

64.2

41.7

Major BPS

44.4

-0.3

1.5

48.8

46.3

Major PPT

62.2

0.28

37.8

Minor 5ss

35.5

-1.7

3.2

45.3

43.3

Minor BPS

45.1

-0.5

1.9

50.54

43.2

Associated Gene:

Gene:

LRRC43

Ensembl Gene ID:

ENSAPLG00000006735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026785

12354212 - 12361480

7269