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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12354955_12355250_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12354955 - 12355250

Intron Length:

296

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGT|GCAGGCTGG

5'SS Class:

weak_major

3'SS Sequence:

TTCGTAGGTAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGTTCAA

U12 Branch Point Sequence:

CTCTTCGTAGGT

Flanking Amino Acid:

SLRIVGKDVSEIDEDLLQLQ

Intron Amino Acid Position:

155

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.2

0.08

1.4

Major BPS

57.8

0.2

1.3

63.4

44.3

Major PPT

48.2

-0.1

1.8

53.3

45.1

Minor 5ss

33.5

-1.9

4.3

46.2

Minor BPS

43.1

-0.4

2.4

62.32

48.1

Associated Gene:

Gene:

LRRC43

Ensembl Gene ID:

ENSAPLG00000006735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035406

12353660 - 12360991

7332

ENSAPLT00000026785

12354212 - 12361480

7269

ENSAPLT00000006986

12353167 - 12361480

8314