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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12355356_12355488_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12355356 - 12355488

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CTGTCCTGGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

CATTGCAAAGGG

Flanking Amino Acid:

TSANLPRTLKVLELCCNAVA

Intron Amino Acid Position:

190

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

68.4

38.7

Major BPS

79.7

0.74

79.6

35.6

Major PPT

64.4

0.32

1.1

61.2

Minor 5ss

25.2

-2.9

3.2

43.6

Minor BPS

32.6

-1.4

2.3

36.8

45.1

Associated Gene:

Gene:

LRRC43

Ensembl Gene ID:

ENSAPLG00000006735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035406

12353660 - 12360991

7332

ENSAPLT00000026785

12354212 - 12361480

7269

ENSAPLT00000006986

12353167 - 12361480

8314