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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12355608_12356157_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12355608 - 12356157

Intron Length:

550

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTACCTCAA

5'SS Class:

major

3'SS Sequence:

TTCTCTCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTTAC

U12 Branch Point Sequence:

CTGCCCTTACTG

Flanking Amino Acid:

YNRLCGPSQDKPNLVSLDLS

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.6

0.27

1.2

41.9

Major BPS

56.6

0.16

1.1

48.9

36.2

Major PPT

0.83

0.6

85.1

22.4

Minor 5ss

39.7

-1.2

3.1

49.1

41.6

Minor BPS

-0

1.8

56.19

45.7

Associated Gene:

Gene:

LRRC43

Ensembl Gene ID:

ENSAPLG00000006735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035406

12353660 - 12360991

7332

ENSAPLT00000026785

12354212 - 12361480

7269