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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12355629_12356157_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12355629 - 12356157

Intron Length:

529

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAATGCCA

5'SS Class:

major

3'SS Sequence:

TTCTCTCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTTAC

U12 Branch Point Sequence:

CTGCCCTTACTG

Flanking Amino Acid:

SQDKYLNADFWPNLVSLDLS

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.1

57.8

40.8

Major BPS

56.6

0.16

1.1

48.9

36.2

Major PPT

0.83

0.6

85.1

22.4

Minor 5ss

31.2

-2.1

3.2

36.9

42.2

Minor BPS

-0

1.8

56.19

45.7

Associated Gene:

Gene:

LRRC43

Ensembl Gene ID:

ENSAPLG00000006735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006986

12353167 - 12361480

8314