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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12356402_12356994_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12356402 - 12356994

Intron Length:

593

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCAGGCAGG

5'SS Class:

strong_major

3'SS Sequence:

CTTCCGTTTAGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCTCAG

U12 Branch Point Sequence:

TGCTCCTCAGCA

Flanking Amino Acid:

FRGLARQPGELIRSEAQVVV

Intron Amino Acid Position:

318

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

67.3

43.7

Major BPS

58.4

0.21

1.5

67.6

40.6

Major PPT

59.9

0.22

1.7

67.7

37.8

Minor 5ss

27.1

-2.6

39.2

46.3

Minor BPS

57.2

0.22

1.8

68.68

43.4

Associated Gene:

Gene:

LRRC43

Ensembl Gene ID:

ENSAPLG00000006735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028026

12353069 - 12361480

8412

ENSAPLT00000026785

12354212 - 12361480

7269

ENSAPLT00000022233

12354296 - 12361480

7185

ENSAPLT00000006986

12353167 - 12361480

8314

ENSAPLT00000035406

12353660 - 12360991

7332