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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12357172_12357530_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12357172 - 12357530

Intron Length:

359

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTGGTGTT

5'SS Class:

major

3'SS Sequence:

AACAATTCATCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTAACAA

U12 Branch Point Sequence:

GTAACAACAATT

Flanking Amino Acid:

EEMEDGGSAESPAVATLGAD

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.2

77.3

37.8

Major BPS

47.6

-0.1

1.2

55.4

40.4

Major PPT

59.8

0.22

56.1

43.3

Minor 5ss

33.6

-1.9

3.5

49.5

46.8

Minor BPS

43.4

-0.4

61.72

41.3

Associated Gene:

Gene:

LRRC43

Ensembl Gene ID:

ENSAPLG00000006735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028026

12353069 - 12361480

8412

ENSAPLT00000022233

12354296 - 12361480

7185