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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12357176_12357414_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12357176 - 12357414

Intron Length:

239

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGTTTAAC

5'SS Class:

major

3'SS Sequence:

TCCTGATGACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

TTCTCCTGATGA

Flanking Amino Acid:

EMEDGGSAEVGWVGEWDFRG

Intron Amino Acid Position:

353

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.8

0.4

64.7

34.4

Major BPS

78.8

0.71

67.6

40.6

Major PPT

62.1

0.27

1.1

54.8

43.8

Minor 5ss

36.9

-1.5

2.6

41.7

40.1

Minor BPS

0.03

67.94

44.5

Associated Gene:

Gene:

LRRC43

Ensembl Gene ID:

ENSAPLG00000006735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026785

12354212 - 12361480

7269

ENSAPLT00000035406

12353660 - 12360991

7332