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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12368942_12369285_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12368942 - 12369285

Intron Length:

344

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGTCA

5'SS Class:

major

3'SS Sequence:

TGTTGTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTCAT

U12 Branch Point Sequence:

ATGATGCAAATT

Flanking Amino Acid:

AALCAVPVIEKQNSSSLSND

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

71.2

34.9

Major BPS

0.65

1.1

77.4

37.3

Major PPT

84.4

0.77

0.8

81.2

36.5

Minor 5ss

37.1

-1.5

3.2

48.4

47.2

Minor BPS

37.6

-0.8

2.3

54.77

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006817

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007073

12367130 - 12369845

2716