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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12460229_12460482_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12460229 - 12460482

Intron Length:

254

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTATAGTTA

5'SS Class:

weak_major

3'SS Sequence:

AATCTGTTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TGTTCTTTAATC

Flanking Amino Acid:

ETVADMDIDSDVEASQRSQA

Intron Amino Acid Position:

341

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.1

0.36

1.1

38.8

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

75.8

0.58

65.9

44.5

Minor 5ss

46.2

-0.4

3.2

63.6

48.1

Minor BPS

81.6

0.97

82.91

30.4

Associated Gene:

Gene:

ZCCHC8

Ensembl Gene ID:

ENSAPLG00000007582

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007912

12459408 - 12469055

9648