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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12460598_12461233_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12460598 - 12461233

Intron Length:

636

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAATATA

5'SS Class:

strong_major

3'SS Sequence:

AATTTCTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTTCCTGGATA

Flanking Amino Acid:

FANYLTNFHAPSPKSSNKRP

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

80.8

33.4

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

84.8

0.78

0.8

81.8

34.9

Minor 5ss

39.1

-1.2

2.9

51.6

45.1

Minor BPS

73.9

0.75

1.4

83.23

30.6

Associated Gene:

Gene:

ZCCHC8

Ensembl Gene ID:

ENSAPLG00000007582

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007912

12459408 - 12469055

9648