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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12463541_12463993_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12463541 - 12463993

Intron Length:

453

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACTCT

5'SS Class:

strong_major

3'SS Sequence:

TATTATCTTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

CAAACCTAAACT

Flanking Amino Acid:

EEHQMKDCPKPRNAARISEK

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

74.7

36.3

Major BPS

75.9

0.64

66.1

40.5

Major PPT

73.3

0.52

1.1

76.4

37.3

Minor 5ss

45.8

-0.4

65.7

45.4

Minor BPS

58.1

0.33

1.8

70.93

45.3

Associated Gene:

Gene:

ZCCHC8

Ensembl Gene ID:

ENSAPLG00000007582

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007912

12459408 - 12469055

9648