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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12465988_12467700_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

12465988 - 12467700

Intron Length:

1713

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTATCCTGT

5'SS Class:

strong_minor

3'SS Sequence:

TTGAAATCTAAAG|A

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

AGTTCCTTATTG

Flanking Amino Acid:

PQLTEGWEIPKYHQVFSQIL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.8

0.19

1.2

43.9

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

59.1

0.21

1.2

57.1

42.4

Minor 5ss

81.1

1.05

1.6

81.7

36.2

Minor BPS

64.3

0.31

1.7

66.64

41.3

Associated Gene:

Gene:

ZCCHC8

Ensembl Gene ID:

ENSAPLG00000007582

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007912

12459408 - 12469055

9648