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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12472575_12473151_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12472575 - 12473151

Intron Length:

577

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGAGT

5'SS Class:

strong_major

3'SS Sequence:

ATCTGGTTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTTTCTTCTATC

Flanking Amino Acid:

VKFRKLMGIKSEDEAGCSSV

Intron Amino Acid Position:

310

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

75.8

39.8

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

71.2

0.48

0.9

61.9

43.9

Minor 5ss

33.3

-1.9

3.3

48.8

Minor BPS

58.4

0.25

1.8

74.54

36.5

Associated Gene:

Gene:

RSRC2

Ensembl Gene ID:

ENSAPLG00000007818

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020592

12472395 - 12486912

14518

ENSAPLT00000008105

12472395 - 12482150

9756