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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12474776_12478533_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12474776 - 12478533

Intron Length:

3758

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAA|GCAGGTAAG

5'SS Class:

major

3'SS Sequence:

ATATAAAAATAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTAATGAAAT

Flanking Amino Acid:

SRSRSRTRSRTAAVDFCMSK

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

69.2

41.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

47.2

-0.1

1.2

45.7

43.4

Minor 5ss

25.1

-2.9

3.8

32.5

36.2

Minor BPS

53.6

0.19

81.24

39.2

Associated Gene:

Gene:

RSRC2

Ensembl Gene ID:

ENSAPLG00000007818

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020592

12472395 - 12486912

14518