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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12496562_12497323_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12496562 - 12497323

Intron Length:

762

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TCT|GCAAGAGTT

5'SS Class:

major

3'SS Sequence:

AAGAGGTACGTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAAACAC

U12 Branch Point Sequence:

TGTTTCAGAGAT

Flanking Amino Acid:

TPLKPQNICSLLKKLVNDLQ

Intron Amino Acid Position:

659

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.6

0.27

1.5

74.6

38.6

Major BPS

53.3

0.08

1.1

61.3

34.4

Major PPT

47.9

-0.1

36.3

39.8

Minor 5ss

-2.4

4.5

57.2

46.9

Minor BPS

45.2

-0.2

68.14

41.9

Associated Gene:

Gene:

KNTC1

Ensembl Gene ID:

ENSAPLG00000007872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008267

12485890 - 12522062

36173