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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12499254_12500091_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12499254 - 12500091

Intron Length:

838

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAA|GCAGATGAT

5'SS Class:

major

3'SS Sequence:

TCTTCTCACAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

AATTCCATATCT

Flanking Amino Acid:

GIRDTNLLKDKLVKYILKQD

Intron Amino Acid Position:

835

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.4

0.41

1.2

69.1

38.7

Major BPS

74.5

0.61

79.6

29.1

Major PPT

55.4

0.12

1.7

65.1

35.4

Minor 5ss

23.7

-3

4.3

38.6

41.5

Minor BPS

61.3

0.43

1.9

81.13

39.9

Associated Gene:

Gene:

KNTC1

Ensembl Gene ID:

ENSAPLG00000007872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008267

12485890 - 12522062

36173