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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12510128_12510558_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12510128 - 12510558

Intron Length:

431

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTATGTTCA

5'SS Class:

major

3'SS Sequence:

TTTTTCCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAA

U12 Branch Point Sequence:

ACTTTTGTAAGT

Flanking Amino Acid:

RTAQCFWNIISAELSEETFP

Intron Amino Acid Position:

1558

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

72.4

32.9

Major BPS

62.3

0.31

1.4

63.7

43.9

Major PPT

93.6

0.98

0.6

89.1

19.8

Minor 5ss

-0.1

2.3

63.3

41.4

Minor BPS

47.9

-0

2.2

68.73

43.1

Associated Gene:

Gene:

KNTC1

Ensembl Gene ID:

ENSAPLG00000007872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008267

12485890 - 12522062

36173