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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12510991_12511536_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12510991 - 12511536

Intron Length:

546

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCATATC

5'SS Class:

major

3'SS Sequence:

AGGTCCTGACCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTAAAAA

U12 Branch Point Sequence:

TTTCCCTTAAAA

Flanking Amino Acid:

KIAQEFPTGKIQALKFCLFL

Intron Amino Acid Position:

1652

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

74.8

35.3

Major BPS

61.4

0.28

1.1

67.9

34.4

Major PPT

56.3

0.14

1.1

48.1

44.3

Minor 5ss

33.1

-1.9

3.1

44.9

43.1

Minor BPS

80.4

0.95

1.2

86.76

30.7

Associated Gene:

Gene:

KNTC1

Ensembl Gene ID:

ENSAPLG00000007872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008267

12485890 - 12522062

36173