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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12519250_12520421_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12519250 - 12520421

Intron Length:

1172

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTGCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

TCTTTTTGAATT

Flanking Amino Acid:

QSEKREQQIQGFLSTCNMET

Intron Amino Acid Position:

1972

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

74.7

35.6

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

76.8

0.6

1.1

79.2

38.4

Minor 5ss

31.4

-2.1

3.2

39.6

46.4

Minor BPS

66.8

0.61

1.3

79.72

Associated Gene:

Gene:

KNTC1

Ensembl Gene ID:

ENSAPLG00000007872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008267

12485890 - 12522062

36173