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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12544234_12546413_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12544234 - 12546413

Intron Length:

2180

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

GTCATTTTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGACAT

U12 Branch Point Sequence:

ATTTCGTTGACA

Flanking Amino Acid:

PEAEGVVLSDSPDAADSTSF

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.7

33.7

Major BPS

67.6

0.44

1.2

Major PPT

77.4

0.62

0.9

71.5

38.2

Minor 5ss

32.8

-2

2.9

39.4

46.1

Minor BPS

67.1

0.53

2.1

80.79

34.6

Associated Gene:

Gene:

PPTC7

Ensembl Gene ID:

ENSAPLG00000008481

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008814

12541129 - 12559845

18717