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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12592652_12594249_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12592652 - 12594249

Intron Length:

1598

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

AAATCTTTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAC

U12 Branch Point Sequence:

TCTCCCCAAATC

Flanking Amino Acid:

INRIYGFYDECKRRYNIKLW

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

89.1

24.2

Major BPS

73.6

0.59

0.9

63.3

35.6

Major PPT

71.6

0.49

0.9

43.1

Minor 5ss

39.8

-1.1

2.9

41.5

Minor BPS

49.1

-0

64.29

41.6

Associated Gene:

Gene:

PPP1CC

Ensembl Gene ID:

ENSAPLG00000008831

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009185

12590564 - 12598749

8186

ENSAPLT00000046876

12590564 - 12605263

14700

ENSAPLT00000026125

12590564 - 12598340

7777