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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12623963_12624263_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12623963 - 12624263

Intron Length:

301

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGACGG

5'SS Class:

major

3'SS Sequence:

CCTGTGCTGGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

GCTCTCATGACA

Flanking Amino Acid:

SSLHVLKELEDKLSQTTEKA

Intron Amino Acid Position:

299

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

57.3

47.4

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

61.9

0.27

57.5

38.6

Minor 5ss

-2.3

3.3

38.8

46.3

Minor BPS

50.4

0.01

1.6

61.33

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004335

12621620 - 12625328

3709