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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12678260_12678427_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12678260 - 12678427

Intron Length:

168

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCCCCA

5'SS Class:

major

3'SS Sequence:

CCCCCCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAA

U12 Branch Point Sequence:

GCAGTCTGAAAT

Flanking Amino Acid:

KKHLELLGTKEQREGTSPGS

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.3

0.34

1.3

53.6

45.3

Major BPS

64.4

0.36

1.2

57.3

41.7

Major PPT

67.8

0.4

0.7

60.8

21.8

Minor 5ss

42.6

-0.8

3.1

57.9

46.3

Minor BPS

47.7

-0

1.6

59.38

43.4

Associated Gene:

Gene:

CUX2

Ensembl Gene ID:

ENSAPLG00000004382

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004516

12664077 - 12688732

24656