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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12679289_12679390_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12679289 - 12679390

Intron Length:

102

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGAGG

5'SS Class:

major

3'SS Sequence:

TGCCTGCTGCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

ACCCCCCCATCT

Flanking Amino Acid:

AEEKIKVLHSALKATQTELL

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

64.3

47.1

Major BPS

0.87

0.8

85.6

Major PPT

65.1

0.34

1.1

57.4

43.3

Minor 5ss

30.3

-2.3

3.3

39.2

46.3

Minor BPS

42.3

-0.5

56.93

45.2

Associated Gene:

Gene:

CUX2

Ensembl Gene ID:

ENSAPLG00000004382

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004516

12664077 - 12688732

24656