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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12679458_12679643_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12679458 - 12679643

Intron Length:

186

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGGC

5'SS Class:

major

3'SS Sequence:

CTTCTCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

TGCCAGCTGATG

Flanking Amino Acid:

RCKYDEEAASKADEVAMIMT

Intron Amino Acid Position:

261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

0.9

69.4

35.6

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

83.3

0.75

0.7

77.4

24.5

Minor 5ss

29.3

-2.4

3.1

34.7

35.3

Minor BPS

35.4

-1.2

2.2

38.38

38.4

Associated Gene:

Gene:

CUX2

Ensembl Gene ID:

ENSAPLG00000004382

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004516

12664077 - 12688732

24656