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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12680791_12680871_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12680791 - 12680871

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCGTGCG

5'SS Class:

strong_major

3'SS Sequence:

GTCTCCTCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCGCAC

U12 Branch Point Sequence:

AGCCTCGCACCC

Flanking Amino Acid:

QLAAKNEAIEKLEEKLQAQA

Intron Amino Acid Position:

377

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

39.9

Major BPS

49.1

-0

1.3

60.7

37.6

Major PPT

75.1

0.56

0.8

69.2

31.4

Minor 5ss

26.5

-2.7

3.1

32.3

42.4

Minor BPS

36.9

-1

2.1

42.5

38.3

Associated Gene:

Gene:

CUX2

Ensembl Gene ID:

ENSAPLG00000004382

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004516

12664077 - 12688732

24656