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Intron Name: Anas_platyrhynchos_platyrhynchos_16_12681260_12681694_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12681260 - 12681694

Intron Length:

435

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGGTAA

5'SS Class:

major

3'SS Sequence:

CGTTCATCTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGTTCAT

U12 Branch Point Sequence:

CTCTCGTTCATC

Flanking Amino Acid:

LEKPGLMASAEEDPSEDESG

Intron Amino Acid Position:

447

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.1

64.5

37.8

Major BPS

72.4

0.56

1.2

39.9

Major PPT

71.9

0.49

0.9

62.9

38.6

Minor 5ss

34.8

-1.7

3.5

42.5

46.9

Minor BPS

47.2

-0.2

2.4

61.11

45.2

Associated Gene:

Gene:

CUX2

Ensembl Gene ID:

ENSAPLG00000004382

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004516

12664077 - 12688732

24656